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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs73365959 chr8:140120629 C/T ESPNP chr1:17013834-17046652:- 0.54 5.93 5.8E-9 Box Plot
THCA rs7336938 chr13:82095471 A/G LHX1 chr17:35294084-35301912:+ 0.31 6.13 1.86E-9 Box Plot
THCA rs7337874 chr13:86313335 G/C TXN chr9:113006091-113018920:- 0.26 5.96 5.04E-9 Box Plot
THCA rs73394751 chr22:24053224 T/C IGLL3 chr22:25713888-25716191:+ 0.7 9.82 7.56E-21 Box Plot
THCA rs73394774 chr22:24062520 G/A IGLL3 chr22:25713888-25716191:+ 0.73 9.78 1.07E-20 Box Plot
THCA rs73394791 chr22:24082086 C/T IGLL3 chr22:25713888-25716191:+ 0.71 9.22 9.56E-19 Box Plot
THCA rs7340181 chr2:113236651 G/A RGPD5 chr2:110550335-110615272:+ 0.3 6 3.99E-9 Box Plot
THCA rs73409590 chr18:11858070 T/C POMGNT1 chr1:46654354-46685977:- -0.55 -5.95 5.1E-9 Box Plot
THCA rs734376 chr1:111148758 C/A DLD chr7:107531415-107572175:+ -0.28 -6.56 1.39E-10 Box Plot
THCA rs73495436 chr8:3286692 C/A CSMD1 chr8:2792875-4852494:- -0.5 -5.97 4.74E-9 Box Plot
THCA rs73503585 chr11:77726979 T/C INTS4L1 chr7:64601603-64694600:+ 0.56 7.07 5.7E-12 Box Plot
THCA rs73534344 chr8:11245562 A/T SGK223 chr8:8175258-8244008:- 0.41 7.54 2.38E-13 Box Plot
THCA rs735765 chr6:28170297 G/A BTN3A2 chr6:26365387-26378548:+ -0.56 -10.21 2.78E-22 Box Plot
THCA rs735765 chr6:28170297 G/A ZFP57 chr6:29640169-29648887:- 0.52 6.42 3.35E-10 Box Plot
THCA rs7357733 chr9:141003946 A/C TUBB4Q chr4:190903679-190906024:- -0.51 -9.16 1.48E-18 Box Plot